YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|21553723
Protein type:	Globular with Signal Peptide
Type Confidence:	0.94
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MIRIFPSLRL TSLLSAAKPL CSSSPAKKPP QYTSLTESKS SRPTKSLSIT PKTPLYLRTP  60
   61 SHATSLSEVW KWHDWAKDLA SSVEESSKNS EDTLDSVILH RELKWLIEDS IVDDPLVILH 120
  121 RSEIADNGKK NVKLRASLEE LYDLWRQRIE KRRPFHYVVG CEHWRDLVLC VEEGVLIPRP 180
  181 ETELIVDMVE ELVTRDEWFK KGILANLGTG SGAIAIGIAK VLGSRGRVIA TDLSPVAIAV 240
  241 AGHNVHRYSL EGMIEVREGS WFEPLKDLEG KLVGLVSNPP YIPSDDIPGL QAEVGRHEPK 300
  301 LALDGGIDGT DSLFHLCHGA SRMLQPGGFF VFETNGEKQS KMIVDYMMTS DLKDCFSDLK 360
  361 IVSDFAGINR FVTGFRL

Type	Start	End	Confidence
Signal Peptide	1	23	0.97
N-region	1	14
H-region	15	20
C-region	21	23
Cleavage Site	23	24
Non-Cytoplasmic	24	377	0.98