YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|21553582
Protein type:	Globular with Signal Peptide
Type Confidence:	0.62
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MATSMSLNLI GAFKGLSLSS TSSFLRGELS FSPKTTFTVT LPLENLQAPV PLTIESAHKK  60
   61 GAGSTKNGRD SPGQRLGVKI YGDQVAKPGA IIVRQRGTKF HAGKNVGIGK DHTIFSLIDG 120
  121 LVKFEKFGPD RKKISVYPRE IVPENPNSYR ARKRENFRLQ REKKKARREN YTYTLPTPEL 180
  181 VLASASIDDA EANPEC

Type	Start	End	Confidence
Signal Peptide	1	23	0.60
N-region	1	14
H-region	15	20
C-region	21	23
Cleavage Site	23	24
Non-Cytoplasmic	24	196	0.98