YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|21537370
Protein type:	Globular with Signal Peptide
Type Confidence:	0.57
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAKLRHSRFQ ARKWSTLMLV LFMLFMLTIV LLMLLAFGVF SLPINNDESS PIDLSYFRRA  60
   61 ATERSEGLGK RGDQWTEVLS WEPRAFVYHN FLSKEECEYL ISLAKPHMVK STVVDSETGK 120
  121 SKDSRVRTSS GTFLRRGRDK IIKTIEKRIA DYTFIPADHG EGLQVLHYEA GQKYEPHYDY 180
  181 FVDEFNTKNG GQRMATMLMY LSDVEEGGET VFPAANMNFS SVPWYNELSE CGKKGLSVKP 240
  241 RMGDALLFWS MRPDATLDPT SLHGGCPVIR GNKWSSTKWI HVGEYKI

Type	Start	End	Confidence
Signal Peptide	1	41	0.56
N-region	1	32
H-region	33	38
C-region	39	41
Cleavage Site	41	42
Non-Cytoplasmic	42	287	0.99