YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|21537360
Protein type:	Globular with Signal Peptide
Type Confidence:	0.78
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVRIIPMAAS SIRPSLACFS DSPRFPISLL SRNLSRTLHV PQSQLFGLTS HKLLRRSVNC  60
   61 LGVAESGKAA QSTTQDDLLT WVKNDKRRML HVVYRVGDMD RTIKFYTECL GMKLLRKRDI 120
  121 PEEKYTNAFL GYGPEDSHFV IELTYNYGVD KYDIGAGFGH FGIAVDDVAK TVELVKAKGG 180
  181 KVSREPGPVK GGKTVIAFIE DPDGYKFELL ERGPTPEPLC QVMLRVGDLD RAIKFYEKAF 240
  241 GMELLRTRDN PEYKYTIAMM GYGPEDKFPV LELTYNYGVT EYDKGNAYAQ ISIGTDDVYK 300
  301 TAEAIKLFGG KITREPGPLP GISTKITACL DPDGWKSVFV DNIDFLKELE

Type	Start	End	Confidence
Signal Peptide	1	17	0.78
N-region	1	8
H-region	9	14
C-region	15	17
Cleavage Site	17	18
Non-Cytoplasmic	18	350	0.99