YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|21537250
Protein type:	Globular with Signal Peptide
Type Confidence:	0.94
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MANLPSSLSM STPFGGPSTS AQNPTGAPAN KDRNLASAEQ LVLDLSNPEL RENALLELSK  60
   61 KRELFQDLAP LLWNSFGTIA ALLQEIVSIY SVLAPPNLTP AQSNRVCNSL ALLQCVASHS 120
  121 DTRMLFLKAH IPLYLYPFLN TTSKSRPFEY LRLTSLGVIG ALVKVDDTEV ISFLLSTEII 180
  181 PLCLRTMEMG SELSKTVATF IVQKILLDDV GMDYICTTAE RFFAVGRVLG NMVQSLVEQP 240
  241 SPRLLKHITR CYLRLSDNPR ACAALASCLP DSLRDGSFSN CLREDPTARR WLQQLVHNVG 300
  301 VGRVPTHQGG GFEHML

Type	Start	End	Confidence
Signal Peptide	1	21	0.94
N-region	1	12
H-region	13	18
C-region	19	21
Cleavage Site	21	22
Non-Cytoplasmic	22	316	0.99