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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: CESA4_ARATH
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.54
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEPNTMASFD DEHRHSSFSA KICKVCGDEV KDDDNGQTFV ACHVCVYPVC KPCYEYERSN  60
   61 GNKCCPQCNT LYKRHKGSPK IAGDEENNGP DDSDDELNIK YRQDGSSIHQ NFAYGSENGD 120
  121 YNSKQQWRPN GRAFSSTGSV LGKDFEAERD GYTDAEWKER VDKWKARQEK RGLVTKGEQT 180
  181 NEDKEDDEEE YLDAEARQPL WRKVPISSSK ISPYRIVIVL RLVILVFFFR FRILTPAKDA 240
  241 YPLWLISVIC EIWFALSWIL DQFPKWFPIN RETYLDRLSM RFERDGEKNK LAPVDVFVST 300
  301 VDPLKEPPII TANTILSILA VDYPVNKVSC YVSDDGASML LFDTLSETSE FARRWVPFCK 360
  361 KYNVEPRAPE FYFSEKIDYL KDKVQTTFVK DRRAMKREYE EFKVRINALV AKAQKKPEEG 420
  421 WVMQDGTPWP GNNTRDHPGM IQVYLGKEGA FDIDGNELPR LVYVSREKRP GYAHHKKAGA 480
  481 MNAMVRVSAV LTNAPFMLNL DCDHYINNSK AIRESMCFLM DPQLGKKLCY VQFPQRFDGI 540
  541 DLNDRYANRN IVFFDINMRG LDGIQGPVYV GTGCVFNRPA LYGYEPPVSE KRKKMTCDCW 600
  601 PSWICCCCGG GNRNHKSDSS KKKSGIKSLF SKLKKKTKKK SDDKTMSSYS RKRSSTEAIF 660
  661 DLEDIEEGLE GYDELEKSSL MSQKNFEKRF GMSPVFIAST LMENGGLPEA TNTSSLIKEA 720
  721 IHVISCGYEE KTEWGKEIGW IYGSVTEDIL TGFRMHCRGW KSVYCMPKRP AFKGSAPINL 780
  781 SDRLHQVLRW ALGSVEIFFS RHCPLWYAWG GKLKILERLA YINTIVYPFT SIPLLAYCTI 840
  841 PAVCLLTGKF IIPTINNFAS IWFLALFLSI IATAILELRW SGVSINDLWR NEQFWVIGGV 900
  901 SAHLFAVFQG LLKVLFGVDT NFTVTSKGAS DEADEFGDLY LFKWTTLLIP PTTLIILNMV 960
  961 GVVAGVSDAI NNGYGSWGPL FGKLFFAFWV IVHLYPFLKG LMGRQNRTPT IVVLWSILLA1020
 1021 SIFSLVWVRI DPFLPKQTGP LLKQCGVDC

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle