YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|50762389
Protein type:	Globular with Signal Peptide
Type Confidence:	0.91
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPALVLASPL ALVYGRSGGL RGPAFGVLXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX  60
   61 XXXXXXXXXX XXKSWHSKDY HEREESWRRV VWEKNLKMIE LHNLDHSLGK HSYKLGMNQF 120
  121 GDMTAEEFRQ LMNGYKHKKS ERKYRGSQFL EPSFLEAPRS VDWREKGYVT PVKDQGQCGS 180
  181 CWAFSTTGAL EGQHFRKTGK LVSLSEQNLV DCSRPEGNQG CNGGLMDQAF QYVQDNGGID 240
  241 SEESYPYTAK DDEDCRYKAE YNAANDTGFV DIPQGHERAL MKAVASVGPV SVAIDAGHSS 300
  301 FQFYQSGIYY EPDCSSEDLD HGVLVVGYGF EGEDVDGKKY WIVKNSWGEK WGDKGYIYMA 360
  361 KDRKNHCGIA TAASYPLV

Type	Start	End	Confidence
Signal Peptide	1	18	0.87
N-region	1	9
H-region	10	15
C-region	16	18
Cleavage Site	18	19
Non-Cytoplasmic	19	378	0.99