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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|50762013
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.55
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPRDEPLPAR RFALSFRVAQ KSVPNHCLTD MPGWPIGFKE SGRARSGVAS GFYATGLVLW  60
   61 LWAYWALPWQ QLQLGALAAP YKFRAARQHP GLKWNKGLLK LQLFHLRWNY SYCFSYGSLS 120
  121 IIGEELLQFL PCRKLLCTAA WNPTPPPVLL SVAHEHAAAA GPLPAFGTGQ AAFRWRGGAA 180
  181 VRWRRAGSGR GPAAPRRGLR LPAVPGAMSG GAAGIPKPLP SSGPKSLREM PHPLATSSSE 240
  241 EMGPALTPSP DLLLPRSIAD KVRPRGGERR GGGRRRRRAE GEGLRLCLPA TPSRLHPGSP 300
  301 GGANPGSRCH RRRAAAGAGL CPPGAGGGDL SLPNGTPVDT SSPASSSSLL NRLQLDDDLD 360
  361 GETKDLFVTV DDPKKHVCTM ETYITYRVTT KTTRAEFDLP EYSVRRRYQD FDWLRNKLEE 420
  421 SQPTHLIPPL PEKFVVKGVV DRFSEEFVET RRKALDKFLK RITDHPVLSF NEHFNVFLTA 480
  481 KDLNAYKKQG MALLSKMGES VKYVTGGYKL RSRPLEFAAI GEYLDTFSLK LGTIDRIAQR 540
  541 IIKEQLEYLV ELREYGPIYS TWGGLEVELS EPLEGVSACI GNCCTALEEL SEDMTDDFLP 600
  601 VLREYILYSE SMKNVLKKRD QVQAEYEAKL EAVALKKEDR PKVPTDVEKC QDRVECFNAD 660
  661 LKADMERWQN NKRQDFRQLL MGMADKNIQY YEKCLTAWES IIPLLQDKPE TK

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle