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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|50761908
Protein type: Transmembrane
Type Confidence: 0.80
Topology Confidence: 0.77
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPSLLPIQNK AFRFSNGKLP LYFVWCCLEA TESLGLSTAF LLVQTQLLRG HQSSPSPALF  60
   61 LGTCLKAAGS LKPSAGLLLL SRCRSIEDSS FNPSLFLRVW EGRGERSWGR MRMEDREKGI 120
  121 TESSSWPRGS LANDDSSMPR WKARAPAAPP TDFTAYSYPS IGDPTTPASP GGALQLRCRS 180
  181 ALCSRPTSAR PRKRRLDGAM ASEGMAPAEL QAEGGTAVEP ESGFGQLLEE EEEDGGYVLY 240
  241 RDRKEWADIE PVPQNDGPNP VVQIIYSEKF RDVYDYFRAV LQKDERSERA FKLTADAIEL 300
  301 NAANYTVWHF RRVLLQSLGK DLYEELKYIT AIIEDQPKNY QVWHHRRVLV EWLQDPSQEL 360
  361 EFIADILNQD AKNYHAWQHR QWVIQEFKLW DDELEYVDQL LREDVRNNSV WNQRYFVIFN 420
  421 TTGYDDPAVL DREVQYTLEM ITAVPHNESA WNYLKGILQD RGLSKYPNLL EQLLSLQPSH 480
  481 SSPYLIAFLV DIYEDMLENQ CENKEETLNK ALELCEILAK EKDTIRKEYW RYIGRSLKNK 540
  541 HSSNTEQSTV TDKQQ

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle