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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|50761868
Protein type: Transmembrane
Type Confidence: 0.84
Topology Confidence: 0.80
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEPFPSDQIQ LPRNMIENSM FEEEPDVVDL AKEPCLHPLE PDEVEYEPRT SRLLVRGLGE  60
   61 HEMDDDEEDY ESSAKLLGMS FINRSSGLRN NMSVYRQSPD GSCSVPSTRT MLICTGVLVI 120
  121 AVSVIMVIYL LPKCTFTKEG CHKKNRTMEL IYPLATNGKL FPWAKIRLPS DVVPLHYDLD 180
  181 LQPNLTTLKF TGSVKIVVNV TQVTKKIVLH SSGLNITKAT ITSTGGSQEK AVELLEYPLH 240
  241 DQIAVMAPES LLAGQNYTVN LEYSSNLSDT YYGFYRVSYK DENSKQRWFA ATQFEPLAAR 300
  301 SAFPCFDEPA LKATFSIRIK RDEKLSTLSN MPKKATTPVT KGIVQDEFFV SLKMSTYLVA 360
  361 FVVADLKNIS METNGSLVSV HAIPQHINQV EYALNTAVKL LEFYEKYFLI NYPLEKLDLV 420
  421 AIPDFQSGAM ENWGLITFRE TTLLFDNNAS SARDKKLITA VIAHELAHQW FGNLVTMEWW 480
  481 NDLWLNEGFA TFMEYFAMEE IFPELHSDED FLNLIFKAMM KDSLNSSHPV SSAVQSSEQI 540
  541 EEMFDALSYI KITNGTLDVK KLMKTWILHK GFPLVTVNRK GKIISLHQEK FLYSVEPDNW 600
  601 TSDTSYLWDI PLTYTTNRCN FTHCINAYLL DQKSAVIELP EEVEWIKFNV DMNGYYIVNY 660
  661 DEDWETLIDL LKKNHTALSA KDRANLINNI FSLASLGKEP LKKAFELIDY LKEESSTAPL 720
  721 SQALFQLGLI FGLLEKRGEQ QLAARVMYRI ECLLGNKIDQ QNWTDDGTIS ERELRSMLLT 780
  781 FACTHDIRNC RTAASKMFDE WMKSNGTMSL PSDLMKAIFI TGAKTNDGWE FLLKMYSSPV 840
  841 PEAEKSKMIE ALASTEDVRK MMWLMQNSLE GEVIRTQELS HIIATISHSL PGHLLAWDFV 900
  901 KENWEKLTRK FHLGSYTIQN IISSSTSQFA TKVHLLEVKT FFESKSEESS KLRCVKEAID 960
  961 TIQLNIQWME TNLAKLQEWL 

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle