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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|50761286
Protein type: Globular with Signal Peptide
Type Confidence: 0.53
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLERRWKHRW GGGSAAPLRA SVQGRRCLQH CPGQGGFEKL LVPAPSAHRS EAGGGQEQIA  60
   61 GDRAPNRSKS QEPELETKLS GAQLPGSQRE GDTPTKPVLI EEPALSFVPF PLPRVPGVCF 120
  121 LPIAVKIVPT VRLNSRQTSW WRYAPQVDRG LMGLPAAAHQ LMGAEEERRD FANSACSCCP 180
  181 PDPGAEQMVQ LGAAPRGTEL LPAANASPEP GAVQPHHVLL SDMQQICVCA APSAPPVLQS 240
  241 PPGLGCFYAS IGAYVQPRAL CLAGDTAANE LLIRPQLSKE KIEGCHICTS VTPGEPQVLL 300
  301 GKDKAFTYDF VFDLDTWQEQ IYTTCVGKLI EGCFEGYNAT VLAYGQTGAG KTYTMGTGFD 360
  361 MSISEDEQGI IPRAIGHLFS GIEERKRAAQ SQGVAAPEFK VSAQFLELYN EEILDLFDST 420
  421 RDPDSRHRKS NIKIHEDASG SIYTTGVTSR LISSQDEVGM ASLIQCLKQG ALSRTTASTQ 480
  481 MNVQSSRSHA IFTIHLCQMR VCARPELVNG EVTGLPDGAQ PTTEYETLTA KFHFVDLAGS 540
  541 ERLKRTGATG ERAKEGISIN CGLVRPWACE GQQEEGRDCL GTRGTFGSCL QLLHAAGDAL 600
  601 ALGNVISALG DQSKKAVHVP YRDSKLTRLL QDSLGGNSQT IMIACVSPSD RDFMETLNTL 660
  661 KYANRARNIK NKVVVNQDKT SQQISALRAE IARLQMELME YKAGKRVIGE DGSEGYSDLF 720
  721 RENAMLQKEN SALRMRVKAM QEAIDSINNR VTQLMSQEAN LMLAKAGDSN EAIGALIQNY 780
  781 IREIEELRTK LLESESMNES LRRSLSRLSA RPSFSVGSSP APGLAGLGSP AAPVETEASD 840
  841 VLRRAKQDLE RLKKKERRQR RKSPEKEAFK KRPKLQQDNG EETDENEAEE EEEEEEQDES 900
  901 GCEEEDGRED EDEDSGSEES LADSDSDAEE KAVNFQADLA DLTCEIEIKQ KLIDELENSQ 960
  961 RRLQTLKHQY EEKLILLQNK IRDTQLERDR VLQNLSTMEC YTEEKANKIK ADYEKRLKEM1020
 1021 NRDLQKLQAA QKEHARLLKN QSRYERELRK LQAEVAEMKK AKVALMKQMR EEQQRRRLAE1080
 1081 TKRNREIAQL KKEQRRQEFQ IRALESQKRQ QEIVLRRKTQ EVSALRRLAK PMSDRVAGRT1140
 1141 SQKPAMLDSG AEVSASTTSS EPESGARSVS SIVRQWNRKI NNFLGDPSPS VNGARPVRKK1200
 1201 FPKKGSSQTF SKAARLKWQS LERRIFDIVM QRMTIINLEA DMERLIKKRE ELALLQEALL1260
 1261 GKRAKLQAES PKEQKGLQEL NEEIEVLGAN IDYINDSISD CQATIMQIEE TKEELDSTDT1320
 1321 SVVISSCSLA EARLLLDNFL KASIDKGLHV AQKEAQIRLL EGRLKQTDVT GSSQNHLILD1380
 1381 ALREKAESHP ELQALIHNVQ QENGYTSTDE EVSEFSLASD GSISQSFSMK GSASQDDFKF1440
 1441 KGEPKLSGQM KAVSAECLGP TLDISTKNIT KSLASLMEIK EDGISFSIRD PYYKEKVSRT1500
 1501 VSLPTRGSTL RKSYDRVSPA SCALGRQPEQ EEFGSCQVSS SQPMCSSDPS WLRPPDVGFT1560
 1561 PPSSPPTRPR NDRNVFSRLT SNQSQGSALD KGIISAVGGT KNARTAPLQC VSVAEGRPKG1620
 1621 VFCLDASDER PKGTPKSSGQ VISGDACAGT TTRTVTSVQG EHQINQIALN PTGTTLYAAT1680
 1681 GNSVRIWELS RLQPVGKLSG HIGPVMCLTV NQTASNHDLV VTGSKDHYVK ISGFPCSAYW1740
 1741 VCALSFIPGR PMVLSACRGG VIKVWNVDNF TPVGEIKGHD SPINAICTNS KHIFTASSDC1800
 1801 RVKLWNYVPG LTPCLPRRVL AIKGRATSLP 

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