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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|50760981
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.71
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGLRGVIGAG GGRCGGVGGL RGGRCGLLGA IVGGMGVIVG GVGVIVGCLG VIGGCLRSLG  60
   61 AALGHCVLLG VIMGCLGVVG GCFEVLWAAW RVIGGCLESL GAALRCWGAV FGAAGSPAVC 120
  121 PPTRWVLWDD PYAVPISPRS AAQQWVRWVL GALGVSRRVP SSQVCTHRLS RAALGSSEGS 180
  181 GLCCEGRQRA QQCGVLLGRC MAGSHLLCLE EMEMRAQPWW AVRIFLPAPG AAPWVKPGLE 240
  241 ELSVGAFGGS FAERRFMNTS AISACCLPGC FLSPSCSEHT DAVSVDNCVH SFPAEITGNK 300
  301 RSRVRSPALG INTNPSPSGK KFRSKPQLAR YLGSSMDLST FDFRTGKMLM SKMNKNRQRM 360
  361 RYDCSNQAKG KPDLNTALPV RQTASIFKQP VTKITNHPSN KVKSDPQKAV DQPRQLFWEK 420
  421 KLSGLNAFDI AEELVKTMDL PKGLQGVGPG CTDETLLSAI ASALHTSTMP ITGQLSAAVE 480
  481 KNPGVWLNTS QPLCKAFMVT DEDIRKQEEL VQQVRKRLEE ALMADMLAHV EEIARDGEAP 540
  541 TEKEGGVEVP RVPIDHHVRH GDAGLGQRFG AAALGSQGCV LTAHGWAVAQ PPPRGQHHAV 600
  601 LLRIANTWGC AQVNEVHCGC VCAYPAVLLL LPSPLPPASI AQSGAALQQS SPGAVQLFGA 660
  661 MGGDLQQQQS QCTGMGFTLC SLSLRCKIKA LRAKTNTYIK TPVRGEEPIF IVTGRKEDVE 720
  721 MAKREILSAA EHFSMIRATR NKVNGLTGAL QGPPNLPGQT TIQVRVPYRV VGLVVGPKGA 780
  781 TIKRIQQQTH TYIVTPSRDK EPVFEVTGMP ENVDRAREEI EAHITMRTGS FVDVNADNDF 840
  841 HTNGTDVCLD LQGGSAGLWA KAPHPARRPA AALRNDSLSS LGSASTESFY SGRVADNSPT 900
  901 SPYSTGGGFT FSDAPAPLGS EECDFGFDFL ALDLTTPSAA AAIWSPFERA ANPLQAFGGS 960
  961 QRRNSGTATP RHSPTLPDSA GGALEHPLAR RIQSNPVSTL SWLPTQGSLS SFSTSTGYSS1020
 1021 SSSLPGSVSA ASGSPTDSSS SDGHRKSSRE CMVCFESEVI AALVPCGHNL FCMECAMRIC1080
 1081 GLEAVGVNAA VGVNAAVGVN AAVGVNAVVG VNAAIEINAA VGVNAAIEVN AAIGVNATVG1140
 1141 VNAPIGINAT VGINATVGIN ATVGVNPVYL KDRTGGAGVG MEMLFLPLDG SRRAGSRGGR1200
 1201 GQSKGVGRER GGKGADEDDE EETQNRREEQ NPMFTE

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle