YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	PHB_CHICK
Protein type:	Globular with Signal Peptide
Type Confidence:	0.83
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAAKVFESIG KFGLGLAVAG GVVNSALYNV DAGHRAVIFD RFRGVQDTVV GEGTHFLIPW  60
   61 VQKPIIFDCR SRPRNIPVIT GSKDLQNVNI TLRILFRPVT AQLPRIFTSI GEDYDERVLP 120
  121 SITTEILKSV VARFDAGELI TQRELVSRQV SEDLTERAAT FGLILDDVSL THLTFGKEFT 180
  181 EAVEMKQVAQ QEAERARFIV EKAEQQKKAA VISAEGDSKA AELIANSLAT AGDGLIELRK 240
  241 LEAAEDIAYQ LSRSRNITYL PSGQSVLLQL PQ

Type	Start	End	Confidence
Signal Peptide	1	25	0.83
N-region	1	16
H-region	17	22
C-region	23	25
Cleavage Site	25	26
Non-Cytoplasmic	26	272	0.98