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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|50760647
Protein type: Transmembrane
Type Confidence: 0.93
Topology Confidence: 0.71
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSAGSQSDRM AQVQLPWVDL LHSQRDAKRL TRGTEQEMDN VGLLLVERFA MSTCKAWNQD  60
   61 GPSASTVTKH GSATHPQAQY GDNPHPAVLC EACGHQEQLS FAKPKVHITS QSTFMTRQIS 120
  121 SLTGKEALTH FPSLGTSTNS AQGKAHVKQC DLLKLSRKQK RLCRREPGLA ETLRDAIRLG 180
  181 IMECQFQFRS ERWNCSLEGR TSLLKRGFKE TAFLYAVSSA ALTHSLARAC SAGRMERCTC 240
  241 DDSPDLENRK AWQWGVCGDN LKYSTKFLKK FLGQKRIGKD LRAKVDIHNT NVGIKAVKNG 300
  301 LKTTCKCHGV SGSCAVRTCW KQLSPFHEIG RLLKLRYDDA VKVFSTTNDA VGHSELASPQ 360
  361 RQSHPTKHHA SPRATDLVYV EDSPSFCRPS KYSLGTAGRT CSREGNCDSM CCGRGYNTQS 420
  421 RLVTFSCHCQ TRSTHRLREA LPPAAPQTQR RDLAGPRPAE AEVASYGSGS CVRRKRRRRV 480
  481 GRKGGGRAAE MEGLYHQTNK QVHEVQSYMG RLETSDKESV HLVENEIQAR IDKVFSNLER 540
  541 LEILSSKEPP NKRQNAKLRV DQLKYDVQHL QTALRNFQHR RYIREQQERQ REELLARTFT 600
  601 TNDSDTTIPI DETLQFNESL QNAHRGMDDL IGSGTNILQG LRDQRVTLKG TQKKILDVAN 660
  661 TLGLSNTVMR LIEKRAFQDK YFMIGGMIVT CVIMFLVVQY LT

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle