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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|50759023
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.70
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPLGMNKHGS RSTTSLPPDP TEIVRSKACS RRVKLNVGGL AHEVLWRTLD RLPRTRLGKL  60
   61 RDCNTHDSLM EICDDYNLEE NEYFFDRHPG AFTSILNFYR TGKLHMMEEM CALSFSQELD 120
  121 YWGVDEIYLE SCCQARYHQK KEQMNEELKR EAETLREREG EEFDNTCCAD KRKKLWDLLE 180
  181 KPNSSVAAKC LPPYQSNDNQ LERLVAVGLP DISKKDLEGC MGIPKSLERC TKCPELLHPA 240
  241 LWLCLRMGAL KSVLQEELSL CGKQQDDSGC IFPSAVMRSA EKRGDFSRLL SVYATCTWSL 300
  301 NGSFAPSAPG SGVYGAAPLL LWTWSFTVLP CAVATSIITD RRTPSFSNVL AVEFWFQEKC 360
  361 TQIFAASQLR NASFFSLFSK YNTYPEGYNF SVKFVTPYLL ASFSMTHLSQ GEPQQRNNQQ 420
  421 RLPPVLHAAG TSMAPVGVPA GISGMLWRCP SPGSSSSHKP QHASCTGKGF SVEGILQQCV 480
  481 SIWFYRSEEP KMSSECCWEG GQGSTGFDLP QSTGEGSRSC PVLWEGSPAI TAREPRVRHS 540
  541 HSEDNKKVGC YQRARRAAQG CGEPSQEPQK GAGSWCRRLP ADGALGAWGL LAAEQYRALH 600
  601 FPSRGPMQLQ QELLETFPAN FSPSYRGDAS FVDASNAFAD FQRPLASNGI GAPLYSCPQR 660
  661 GSGTDTAFAQ QSGASTVPTP WVCQWCCYQG PHVPARAQGE DTACQDAVGS SRSALHRPPT 720
  721 TARLIASTFI YPRRRKAQLS NENTEVRERV LFSLSTAIYQ SRVIATRTDA GHASRALANA 780
  781 SHRCWHSLRA QGACAQMFCI SRGHAGSALP IMELSMSPLR FSLLPAEEKM FPLRKPSCGQ 840
  841 ARLLFCLRFY VPFSIHGNGL RAVSVSSDFG ETQGLTWIPQ GIQACTNDFS VQCRYVGALH 900
  901 HAHSSTASKT LLHRVLHAGP MQPELLFVFS RAGFQPECPN SICFSSQLAP KVELKVFKPP 960
  961 FRDLVVALSV RFVFPTLLWV CPSAGFPLLI ISKCILRSML GSLSDLVLLE ILGILYCSHR1020
 1021 EAKQQNRNTA ISADVLSTGR PQERLLQTMA HTVHGLRRRV EALPETTKVF TIHVASVCFL1080
 1081 YSSKACTAIL AIISIMFIVL STIALSLNTL PELQGMDEFG QTTDNPQLAH VEAVCIAWFT1140
 1141 MEYLLRFLSS PKKWKFFKGP LNAIDLLAIL PYYVTIFLTE SNKSVLQFQN VRRVVQIFRI1200
 1201 MRILRILKLA RHSTGLQSLG FTLRRSYNEL GLLILFLAMG IMIFSSLVFF AEKDEDDTKF1260
 1261 KSIPASFWWA TITMTTVGYG DIYPKTLLGK IVGGLCCIAG VLVIALPIPI IVNNFSEFYK1320
 1321 EQKRQEKAIK RREALERAKR NGSIVSMNMK DAFARSIELM DIVVEKNGES IAKKDKVQDN1380
 1381 HLSPNKWKWT KRTLSETSSS KSFETKEQGS PEKARSSSSP QHLNVQQLED MYNKMAKTQS1440
 1441 QPNLNTKESS QPGKQKEELE METLPGPMVP LLTTRTDGII DMRSMSSIDS FISCAAEFPD1500
 1501 SGRFSHSPLA TLPCKGGINV IQEQSRAEGS SARFAEINPS CEGSHRSAFF IESPKSSIKA1560
 1561 SNPLKLRSLK VNFMEEDAST LVPASNVLRI YPDTLKSRGA AAAAVTDTSL LSDRSLMSPE1620
 1621 TSIYTTASAR TPPKSPETQT AIAFNFHDAG IHKYIDADTD DEGQLLYDSS PPGNVSPKYN1680
 1681 VTNIGYLKQK DSAYRTEKNH LEAAALPTSP KLIGQNCIYS MEGITGRTQG NQETVRLENH1740
 1741 ISPEVHVLPG SGGHANTHDQ SI

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