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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|50758008
Protein type: Transmembrane
Type Confidence: 0.83
Topology Confidence: 0.51
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSRSPPELLP PILRLFQPLR AVKGEAGERN PIPIRHPQWE PMTPKPLQGA ASSWWVCRAI  60
   61 CGAHGVPAGS WAGQQALLCF GPTNPGGSSP WLRYPVADNN ALQIKAWPQR GAQGGQQKTA 120
  121 GMKAETCFLV LLAKIILFRG SASSSYDLPE KLSDAFLLSS VDEAKQLVDS AYKDTRDRIK 180
  181 KNLENDALNP IELLRYFKQP VAGTRAAIRA ADYMGTTLTL LKEKLSRVVK GDFNVTGRDV 240
  241 AVPGAVLLRG DAGIYMLTPA QMGLLFKVTG CEEQNKKVNC EFSSRYRTIT GKCNNRRNPL 300
  301 LGASNRALAR WLPADYEDGV SIPHGWTNRR CSFGYPFPLV RRVSNEIVRF PPGQLKFDQQ 360
  361 RSLMFMQWGQ FIDHDLDFSP ESPARVTFNG RVDCHTSCAK LPPCFPIQIP PNDPRIKNTR 420
  421 DCIPFFRSAP ACDSGRATRE QINALTSFLD GSMVYGSEQH LANRLRNWNN QLGLLAVNQN 480
  481 FTDNGMAYLP FVRMSKDPCL KVSGSANIPC FLAGDSRASE MLELACMHTL FVREHNRLAI 540
  541 GLKRLNPHWN GERIYQEARK IVGAMIQIIT YRDYLPLLLG RNLQRWIPSY KGYKESVDPR 600
  601 ISNVFTLAFR FAHASIPPSV GRLNQNYQST YPKLKLSKTF FGVWHIVKGG NCCESIAGGI 660
  661 DPFLRNLMAS KAKLMTQDQM MVDELRDHLS EQIERIGLDL AALNMQRGRD HGLPGYVSWR 720
  721 KFCGLPQPYD VRSLGQVLKN KNLARKFMKL YGTPRNIDIW VGALAEPFVD GGRVGPLMAC 780
  781 LIGTQFRNTR DGDRFWWENT GVFTAQQRSS LAKISLSRII CDNTHITKVS RNIFQANSYP 840
  841 HSFVSCSSIP KLDLRAWKSN CMEESTEQVL ILCWRYPTFK YFFKMTFYQV WIFTISFLVV 900
  901 ILALPRGRSF ENMKILRTAI LTVKYALGVK IVVKGKENLR TKKPCVLVLN HQNSLDVMVI 960
  961 MQMIPNRCVP IGKKEILYMG PFGLACWFSG IVFIDRKKRE ESIAVLTEMA HTMRKDNFHV1020
 1021 LIFPEGTRNH SGSMLPFKRG AFQLAVRAQV PIVPVVISSY NSFYSQKEKR FTSGTSTIQI1080
 1081 LPPVETVGLS SDDVPKLTEQ VRDSMMNAYQ RISGMTNGGS HE

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle