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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|50757308
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.90
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 RMSCGYVLCT VLLSVAVLLA VTVTGAILFM NHYHTPVTEP PPVISTNPEE ANALVTIEKA  60
   61 DSSRINIFID PNCPDPAGNV GRLEGLQGSL LRALAEHDAE AKATKGQQKA LLLGVADEVA 120
  121 KLVTHAAQLR ADCDGLKKGH SAMGQELSAL QSEQGRLIQH HSTQSLEGKG GKERSSSRPR 180
  181 DCFDIYASGQ QEDGIYSIFP THYPSGFQVY CDMTTDGGGW TLLSESQTNM ARLVSSVSDV 240
  241 LDTLQKERGG VRPRLKADLQ RAPARGARPR GCSNGSRPRD CFDIYASGQQ EDGIYSIFPT 300
  301 HYPSGFQVYC DMTTDGGGWT VFQRREDGSV NFFRGWEAYR DGFGKLTGEH WLGLKRIHVL 360
  361 TVQGSYELRV DLEDFDNGTA FAHYGSFGVG LFSVDPEEDG YPISISDYSG TAGDSFLKHN 420
  421 GMKFTTKDLD NDHSENNCAA FYHGAWWYRN CHTSNLNGQY LKGHHSSYAD GIEWSSWTGW 480
  481 QYSLKFTEMK IRPVREENYR MDIPPPDPCP YRCPTLPFLL EHPMPQTCPV VLWVWEGTAE 540
  541 FQALGTSRWL 

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle