YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|50757265
Protein type:	Globular with Signal Peptide
Type Confidence:	0.54
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPRAAATGLH FPACPAPPRC CRPRREGAVR AKMAEGVLSP GVNLEAFSQA IAAIQALRSS  60
   61 VTRVFDCLKD GMRNKETLEG REKGFVAAFF ESLHSVSRVL GELERLSNLV GKPSENHPLH 120
  121 NSGLLSLDPV QDKTPLYSQL LQAYKWSNKL QYHAGLASGL LNQQSLKRSA NQMGVSAKRR 180
  181 PKAQPTTLVL PPQYVDDVIN RIDRMFPEMS IQLSRPNGTS AMLLVTLGKV LKVIVVMRSL 240
  241 FIDRTIVKGY NENVYTDDGK LDIWSKSNYQ VFQKVTDHAT TALLHYQLPQ MPDVVVRSFM 300
  301 TWLRSYIKLF QAPCQRCGKF LQDGLPPTWR DFRTLEAFHD TCRQ

Type	Start	End	Confidence
Signal Peptide	1	15	0.57
N-region	1	6
H-region	7	12
C-region	13	15
Cleavage Site	15	16
Non-Cytoplasmic	16	344	0.96