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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|50757151
Protein type: Transmembrane with Signal Peptide
Type Confidence: 0.59
Topology Confidence: 0.55
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLLVTNVCHV LTAGHSQCAA LGSSGTAELH SISDPACPGG QKQHLREQPL TFAADYNFTE  60
   61 RRAAMTQINT LKHCFYGCRR QSRAWDPADT SWSLCVRLSG FPEGRSRTRT RTGEQPQRLQ 120
  121 LLPCRTTGAD TVTHVPLLVR CLRTLEPMER PHKWRHYCTL IPRNRRCHKP PAAPPALTFT 180
  181 RALKLYERSR TPPAGSISLL CAHPELCAPT CAAPFPAGTA PCPTARCAPP CTALCTLMAV 240
  241 VAVPPSSCVR FCFQEDDVLR SAPTAPCEAE PEPRRAISSI RAISSRCCSP GGLRIAPRGH 300
  301 RGRYLPLPSP RPPSALSALT APLPAPLRGA RGPTVITVLS HAPAARPHPH GPPPGTGRGG 360
  361 AQRSGAGRGH RARGATMADC EAGGAVKAQQ RLHGDADTGL GVCGWILVTF SFIFTLLTFP 420
  421 FSIWMCIKIV KEYERAIIFR LGRILKGGAK GPGLFFILPC TDSFIKVDMR TISFDIPPQE 480
  481 ILTKDSVTIN VDGVVYYRVQ NATLAVANIT NADSATRLLA QTTLRNVLGT KNLSQILSDR 540
  541 EEIAHNMQAT LDDATDNWGI KVERVEIKDV KLPIQLQRAM AAEAEAAREA RAKVIAAEGE 600
  601 MNASRALKEA SMVITESPAA LQLRYLQTLN TIAAEKNSTI VFPLPIDMLQ GILGAKR

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle