YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|50756484
Protein type:	Globular with Signal Peptide
Type Confidence:	0.96
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MATEPELKWV ALWVRVRWAA VLVLLLGSLL LLLLPLPAVE EKCHAMLRGL SFLRSKLGTG  60
   61 YTGVTRYTGQ STGLSVTSQG LELLVLKGKA SPEVKLEAKA ALNQALEMKR QGKREKAHKL 120
  121 FVYALKMDPD YVDALNEFGI FSEEEKDILQ ADYLYSKALT LSPCNEKALI NRDRTLPLVE 180
  181 EIDQRYFSII DSKVKKVMAI PKGNSALRRV MEESYYHHIY HTVAIEGNTL TLSEIRHIIE 240
  241 TRYAVPGKSL VEQNEVIGMH AALKYVNTTL VSRIGSVTIT DILEIHRRVL GYADPVEAGR 300
  301 FRTTQVFVGH HIPPHPQDVG KQMQEFVQWL NSEDAMSLHP VEFAALAHYK LVYVHPFIDG 360
  361 NGRTSRLLMN LILMQAGYPP ITIRKEQRAE YYHVLEVANE GDVRPFIRFI AKCTETTLDM 420
  421 LLIATTEYSV GLPEADGSSA GCKQTIPVKT

Type	Start	End	Confidence
Signal Peptide	1	38	0.96
N-region	1	29
H-region	30	35
C-region	36	38
Cleavage Site	38	39
Non-Cytoplasmic	39	450	0.99