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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|50756401
Protein type: Transmembrane
Type Confidence: 0.84
Topology Confidence: 0.22
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAGFPALQSP HGLGLGTVEL SRAAVNSWFW SAWPQPYSQK WFCTSARGLP TGNLAPRDLV  60
   61 LCPGSTTLGI KLGGGRAEQH CGTRDVVSSL SLATMFSACG GARGKDRAAV AAQGRCGCVR 120
  121 GHEVAVPSRC ERQQGCARGR RNDLPLRESP IGGAWRESPR CSGTALSAAA LRGKVGNSPR 180
  181 PLRSVACGDT GDLGARIPSR RGSAAVGATR SIAASFGVSG RLQRSPSAEP HRERFCTEHE 240
  241 CEVWEPWHQF AFEKLARSFL DLISPLQQSD PIALCRCSVL LTAFGTRWAA GEEHLLVGNR 300
  301 GCEQHRAPRE RAVVCHCQGS WVIGFGFSGL TVMGALLWQF KDTAAEVHGC ETHSGAAANA 360
  361 ATPQSDSHKF PMQRAAKSIH TQLTQSHVLL WFLTGLPEMC RASRDVAVRL CCLYRSPSAE 420
  421 NRWRVGACWA LEGASRRRAC PVLTVPKTPT CGCCWSAGTF GLTHMAVHTA LTGSTGQYMS 480
  481 VAFGLWKLQI SSVRVAVWLL LVIAAYCMAA FPERLPEGFG YSSALLWARW WVPGLFQGPA 540
  541 AGPRGAVALQ VPALSDSGGV IEKALAKNKC SLSGSSQADC TKIVLTTLWM MLRAHFLVIL 600
  601 APGTALTVCN PSTSEKGKSK EAAGKPFATK IQTDPVLSEL SSQVREQSGL LASLVFSDQT 660
  661 QAEKPSLRGA SLGASGPVLG MGSDLSRCVR NLQVSCSTGK RLPHFSVVSL LRAVASLKLT 720
  721 GTAVSYGASS SGGCAAAAFV VGLCGKLVSP KWKNFKGLKL QWRDKIRLNN AIWRAWYMQY 780
  781 LEKRKNPVCH FVTPLDGSVD VDEHRRPEAI ATEGKYWKRR IEIVIREYHK WRTYFKKRLQ 840
  841 KHKDEDLSSL VRDDDVVLWQ KRRYGRETPV PMEEGSLLDA DMLMSEFTDT LFSTLSSHQL 900
  901 VSWPNPREIA HLGNADMIQP GLIPLQPNFD FMDTFEPFQD LFTPSRSSAY FPSVSAVSSA 960
  961 TTDSSSHSSQ SPVLPTGSLP NTLPSGNISD GLIASSVPSP VIPDVGTDQC SSIRSGGSFI1020
 1021 QPADFAPDSS LSGPQTFLPV FQTPLPLLQP AAQQHQSPLP AVPLNTSLSS PPSAFAAPET1080
 1081 QKFGLCESTV ITHTASATLT HNAPATTFSQ SQNLVLATQQ PGAGVPCNLA FQTTVLQGQP1140
 1141 RPQLQSQLTF ALPKAVPLAS AGTRPKQSQK IASAPKPETV SLLLKNAFIT PAAFQGQSRA1200
 1201 VIVTPTPLKR EGILTPAMPQ SNVKIAPAGI ARAPGVTEFR SNILVGPAQQ APSSQQSQST1260
 1261 VSHLFSTNVV QDVLVKGEQV PSHNSSSQVP SPTPSRDCQN SGQASPCTSE QSPSPQSPQN1320
 1321 SCSGKLATDS QMAALKTQRM KRTSSEQKRR FNIRIGCSIL NSLVSVNSKL ISHAITLQKT1380
 1381 VEYIAKLQQE RTQMQEETRR LREEIEELNA AIISCQQRLP ATGVPVTWQR FDHIRSMFDE1440
 1441 YVRNNTLQNW KFWIFSIIIK PLFESFNGMV STASFKDLNQ TAIAWLDQHC SLPVLRPMVL1500
 1501 SSLRQLSVST SVLSDPSRLP EQATEAVSRT NETAGET

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