YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|50755944
Protein type:	Globular with Signal Peptide
Type Confidence:	0.60
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTLSDLQSTQ TMPRKRKLLV QLSALQSNSS IPPSDALKNP TTTPDGNSSP KSSKYFATEK  60
   61 KQSSQLEADF FNQPCISLAK SFLGQILVRK LPDGRELWGR IVETEAYLGG EDEASHSKGG 120
  121 KQTQRNAAMF MKPGTLYVYQ IYGIYFCVNV SSQGEGAAVL LRSLEPLQGL DVMREMRSAS 180
  181 RKGPAKPLKD WQLCNGPSKL CQAFGIDKAF DQRDLTRDAA IWMVPGQELP GEQDVVATTR 240
  241 IGIGNRGEWS QKPLRFYLRG NKFVSVVDKK MEREMAAMEP ISCS

Type	Start	End	Confidence
Signal Peptide	1	29	0.60
N-region	1	20
H-region	21	26
C-region	27	29
Cleavage Site	29	30
Non-Cytoplasmic	30	284	0.98