YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|50754911
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRTWIFFFLC LAGKALAAPQ EALPDETEVI EDLTTEGPVG ANPVQVEVGE FEEPTEDVEE  60
   61 IVAENPCQNH HCKHGKVCEV DDNNSPMCVC QDPSSCPATS GIFEKVCGTD NKTYDSSCHF 120
  121 FATKCTLEGT KKGHKLHLDY IGPCKFIPAC LDTELTEFPL RMRDWLKNVL ITLYERDEDN 180
  181 NLLTEKQKLK VKKIHENEKR LEAGDHTVEL LARDFEKNYN MYIFPVHWQF GQLDQHPIDG 240
  241 YLSHTELAPL RAPLIPMEHC TTRFFEACDL DNDKYIALEE WASCFGIKEQ DIDKDLVI

Type	Start	End	Confidence
Signal Peptide	1	17	0.99
N-region	1	8
H-region	9	14
C-region	15	17
Cleavage Site	17	18
Non-Cytoplasmic	18	298	0.99