YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|50755847
Protein type:	Globular with Signal Peptide
Type Confidence:	0.76
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAAPAPVSSS ARMAPAVSGA MVRMNVLADA LKSINNAEKR GKRQVLIRPC SKVIVRFLTV  60
   61 MMKHGYIGEF EIIDDHRPGK HCCQFHRQTQ QGTMVRMNVL ADALKSINNA EKRGKRQVLI 120
  121 RPCSKVIVRF LTVMMKHGYI GEFEIIDDHR AGKIVVNLTG RLNKCGVISP RFDVQLKDLE 180
  181 KWQNNLLPSR QFGYIVLTTS AGIMDHEEAR RKHTGGKILG FFF

Type	Start	End	Confidence
Signal Peptide	1	28	0.69
N-region	1	19
H-region	20	25
C-region	26	28
Cleavage Site	28	29
Non-Cytoplasmic	29	223	0.99