YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|50755631
Protein type:	Globular with Signal Peptide
Type Confidence:	0.53
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAAASSPSVF MVAVNGQIES GQFPGFDDLY CKFCFVYGQD WVPAAGLEEG ISQITSRSDV  60
   61 APTTFVWNFP IEITFKSTNP AGWPQIVVSV YGPDFFGNDV VRGYGAVHIP FTPGRHKRTI 120
  121 AMFVPESTSK LQKFTSWFTG RRPEFTDPKV VARGEGREVT RVRSQGFVTI SFNVVTKDMK 180
  181 KLGYDVSPSD MQNPSLVPAT ERIHKY

Type	Start	End	Confidence
Signal Peptide	1	16	0.53
N-region	1	7
H-region	8	13
C-region	14	16
Cleavage Site	16	17
Non-Cytoplasmic	17	206	0.99