YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|23197966, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.89
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVATFATPST VIGLGGSSIT TKPFSSSFLK PTLSAKNPLR LAGASGGRVT CFERNWLRRD  60
   61 LNVVGFGLIG WLAPSSIPAI NGKSLTGLFF DSIGTELAHF PTPPALTSQF WLWLVTWHLG 120
  121 LFLCLTFGQI GFKGRTEDYF

Type	Start	End	Confidence
Cytoplasmic	1	60	0.95
Transmembrane Helix	61	80	0.90
Non-Cytoplasmic	81	109	0.89
Transmembrane Helix	110	132	0.89
Cytoplasmic	133	140	0.93