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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: PDI13_ARATH
Protein type: Globular with Signal Peptide
Type Confidence: 0.99
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MASSSTSISL LLFVSFILLL VNSRAENASS GSDLDEELAF LAAEESKEQS HGGGSYHEEE  60
   61 HDHQHRDFEN YDDLEQGGGE FHHGDHGYEE EPLPPVDEKD VAVLTKDNFT EFVGNNSFAM 120
  121 VEFYAPWCGA CQALTPEYAA AATELKGLAA LAKIDATEEG DLAQKYEIQG FPTVFLFVDG 180
  181 EMRKTYEGER TKDGIVTWLK KKASPSIHNI TTKEEAERVL SAEPKLVFGF LNSLVGSESE 240
  241 ELAAASRLED DLSFYQTASP DIAKLFEIET QVKRPALVLL KKEEEKLARF DGNFTKTAIA 300
  301 EFVSANKVPL VINFTREGAS LIFESSVKNQ LILFAKANES EKHLPTLREV AKSFKGKFVF 360
  361 VYVQMDNEDY GEAVSGFFGV TGAAPKVLVY TGNEDMRKFI LDGELTVNNI KTLAEDFLAD 420
  421 KLKPFYKSDP LPENNDGDVK VIVGNNFDEI VLDESKDVLL EIYAPWCGHC QSFEPIYNKL 480
  481 GKYLKGIDSL VVAKMDGTSN EHPRAKADGF PTILFFPGGN KSFDPIAVDV DRTVVELYKF 540
  541 LKKHASIPFK LEKPATPEPV ISTMKSDEKI EGDSSKDEL

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle