YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|30681429, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.56
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKKTKTMVAS ISTLIRRTYP STNQCNSLAT IQSQTQLPRE SLQHHSSAEG RLRFSGRVFC  60
   61 SESGAGCWNC GEKAAFLFCN SCRSIQPVDD SVDYFQIFGL EKKYEIDPGS LEGKYKDWQK 120
  121 KLHPDLVHNK SKKERDYAAE QSAKVTEACR TLTKRLSRAM YIMKLNGVNV NEEETITDPT 180
  181 LLMEIMELRE AISEADDSTS LNQIRSQVQE KLKQWSDSFV EAFESQKFDD AVKCIQRMTY 240
  241 YERACEEILK KL

Type	Start	End	Confidence
Signal Peptide	1	20	0.55
N-region	1	11
H-region	12	17
C-region	18	20
Cleavage Site	20	21
Non-Cytoplasmic	21	252	0.99