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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|40882245
Protein type: Globular with Signal Peptide
Type Confidence: 0.50
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MYLPRQLISK LYLHLQNTRH PLSPPVLILV ALETDALCAC RILTQLLKHD YIPHKIQPVA  60
   61 GYSDLERAGT ELVSPMMETR GGAGGVVVCL GVGGMVDLGT VLGLEPEGEE NTFGGVEVWV 120
  121 IDSHRPWNLG NVFGGFPLEP ETQEARTFSA RTPIGVNGGR IERAYKPGKG GIIVMDDGDI 180
  181 EDELSKERDA YLALVDMPEI EDDGRDLGDS DEDESENEED TGDTSVVAGR KRKSWSDFDE 240
  241 DDDEDDRPRQ RRRSNSIQSS PIPDSPRRPQ HRGLISLRDD ALFSSDALEA PPAAQPPRGP 300
  301 SANTLRRRLL RLRRENEGVL REYYRLGTSY SEPISSMMYS LASELGREDN DLLWLAIVGV 360
  361 TSMELIRQLL RDEVRRLNPP EIGNGRVLPE TTGIIPTTAR SPEDTSIRLS PEPKFLLIRH 420
  421 WSLYDSMLHS PYLFSRLKTW SEAGMKRLHK LLAKMGVSLV QCKQSYAHMD MMLKRELRTK 480
  481 LLKYASLYNL DELVPTIDTD GKDRGGAKDG WGFVRSWGWR ATLSAQDVGV VVGALLEVGK 540
  541 NTTSADDLPA GPSQDLLDVD NNQSQSEEWI PRFWEAYDAL EDIEALKAGL PTAQYLHKAI 600
  601 FTTGTTILKK KQISHLRAFR MCVVKDSPDA TLFNHPGALT KLALWIGEAL AEQEKEATGG 660
  661 RLAHGGRGTP LVVASLDDKR GVYVVVDEDE LDQELERGYG LNKFGTAFQD VVAETNARVR 720
  721 IDSFEHCVVE VKKEDLSGFL ESLSMKVVIG 

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle