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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|50754521
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.48
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGICNVSLTE TFLLKLGYVN LCTVCAHIVD VPLSFIQFHG SDTGNEVCNS ASVAWEDLND  60
   61 IEGKATGGLG GRWDSACAPS SAVTMSPPLT SDLGYVPPDG GWGWAVVFGS SISVGFSYTF 120
  121 PKAFTIYFKE LQAVFSISYS QLAWITSIMC ATTYGGVWKV AGAALSLGQG KGACSYGDYM 180
  181 GCFSQGTAGK FLRTITTTEQ WKQFLKPLND FRRFNERKTL LSYRAVAPTS DCNRTPCAKG 240
  241 SRASQGAPGA RSRPVAMPPH SDAGPVAGPP DGGWGWVVVF GAFISIGFAY AFPKGIAIFY 300
  301 KEIQDFFDTS YSEIAWVSSI MLATTYGAGP ISSILVNRYG SRPVVILGGL LCGIGMVSAA 360
  361 FCTSIIQLYI CVGFITGLGL ALNLQPSVII IGRYFLKRRP IANGLAMAGS PVMLCTLAPL 420
  421 NQFLFDNYGW RGSFLILGAI LLHCCVAGAL FRPISADKAS VKTQSIEEGK EVLKEEVTKD 480
  481 VIEMNSPTNI RMETKTEEEE ERDCCEKVNK YLDFSLFKHR GFLIYLIGNV LMFLGFFAPI 540
  541 VFLAPYAKHI GIDEYSAAFL LSILAIVDMV ARPTTGIIAN SKWVRPRIQY FFSFSIAFNG 600
  601 TCHLLCPLAS GYTGLVIYSV FFGLAFGMVC AMLFETLMDL VGASRFTSAV GLVTIAECCT 660
  661 ILLGPPIGGT LIDTFGDYKY MFIKCGAVMV LAGTFLFIMN YYNYRMLAKE EKKRKAKEED 720
  721 TKPVRTENEG RNNWNKEHVQ DGPELEPLRE EQEGLKKEAN APSVQVETKT AEEDDPTLKV 780
  781 TAVHRAAITF LCFSGTPTVT LTIKEYYLDL SEPRESVLMT DIHNCQQSFP QQQYSCETKT 840
  841 SSAISFELMV GVHSTKRLFC CRKAFQGELS SFSCCSVYKF PFKLTTQSDF FPLVKSPDTF 900
  901 SPPRAAPTGT RGEVVLVAAA QAEQSSWLAL LELCPFRSLG NALLLNIMRI IWLIRLFAFK 960
  961 GYTSALLLAL WHERKELRPS RTGDTGTQRK FERKLCHQKH MKSQTENLLN KPEGKNVVYL1020
 1021 VNRKSELTAS SASPTSQAKN QPEEKLLAAA ESLILHSESA PASAAQALQL YSEWRIEAEQ1080
 1081 EIATPCLAKN GSSEEPNQST GEQKLAKEEK TDVVSATGRD ARDEHHGELF VGPVVGSRAL1140
 1141 WKAGLTRLLL GKHFLLAPER EGADLWHAAQ ACQLYVGTVA GGMMAAVNVE LFPQEDHISM1200
 1201 PTYLLHPTSS MPSTASSHPP YRLCNLFAYS SCQSHENKAV SIATKPSFLS GKSSSRDYNL1260
 1261 LAAPLYHLIP VGIQEAGSAH EEMLLTLSAA PVGQMVVVYE HKVTRMQTLT RKAPFPTALP1320
 1321 EVQRKAEERC QGHNSEVEVG LPLISQHCSA VGVMPEGSML PLCQFAAPAA VADSAITTEV1380
 1381 AAILDQRPPW TEAIRGPKTD VSYPQQHEGL YSRERNPGDS ASDEAVGVLL AITLPDSYGL1440
 1441 FDIANLKSDY QLLSGQAVEA ARILPKLQAV CIHSLRYCSS WECSKDTWRT EMGNYRDSNV1500
 1501 ELLHCKQGGI TAIT

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