YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|50754383
Protein type: Transmembrane
Type Confidence: 0.82
Topology Confidence: 0.69
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSRLPASSEP GSEPNPTFWL WMRNLPEGGR GNKGSLELIY SLRHKGRGWR KGRDSCSWRG  60
   61 RFHTEPPRTL GGSPKRQQRR ANPASQPAER FRGAAVQNAA HEETSRFVSS LPRGCVTPAP 120
  121 NSCRKSASDP TLGNLSPIRS VISTARVNTL KQGQGLNHVM ATCTARCPAG LTPTAVTADT 180
  181 VAPCFPLQHG QHKAPRLQPR LSTQALARPP PPPGASRAAG RRHRASPIPL GAAILCPPRT 240
  241 ARAPPSCALP MHASAMAGLL CRLLLCLAAV GATAADLQLE EARRTVDLST HLAKVSAELS 300
  301 LANAPGGPAA SSFLLALEPG LEPRLAYLGV QVKGEEEEEN ILEVKETKVK GKSGKFFSVK 360
  361 LPSPLAPGAK VRVSVEMVFT HVLQPYPTHI TQSEKQFVVF EGNHYFYSPY FTKTQTTRVK 420
  421 LASRNVESYT KLGNPSRTED MIEYGPFKDI PPYSQDTLKV HYENNSPFLT ITSMTRVIEV 480
  481 SHWGNIAVEE TVDLKHTGAV LKGPFSRYDY QRQPDSGISS VKSFKTILPA AAQDVYYRDE 540
  541 IGNISTSHLL VLDDSVEMEI RPRFPLFGGW KTHYIIGYNL PSYEYLYNLG DQYALKMRFV 600
  601 DHVFDEQVTD SLTVKIVLPE GAKNIHVDSP YEINRASDEL HYTYLDTFGR PVIVAHKNNL 660
  661 VEQHIQDIVV HYTFNKILML QEPLLVVGAF YILFFTVIIY VRLDFSITKD PAAEARMKVA 720
  721 CITEQVLTLV NKRLGLYRHF DEAVNKYKQS RDISTLNSGK KSLETEHKAL TNEIAALQSK 780
  781 LKTEGSDLCD KVSEIQKLDG QVKELVLKSS VEAERLVAGK LKKDTYIENE KMHSNKRQDL 840
  841 VTKIDNILDA L

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle