YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|50754117
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.93
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAVPSDNRDR GVGSGAAASG RARWRLPLPL RLRLRVVVTA AHSGEEPGLQ PEGYSEEEQE  60
   61 SEEEREQEEE EEQEQASEED EEQEQASEEL SEEPSSPAAM LDVFRSIPTQ MDYKGQKLAE 120
  121 QIFQGIILVS AVIGFIYGYV TEQFGWTVYI VMAGFAVSCL LTLPPWPMYR RNPLKWLPVQ 180
  181 ESGTEDKKPA DRKPKRHSKS

Type	Start	End	Confidence
Cytoplasmic	1	120	0.99
Transmembrane Helix	121	140	0.93
Non-Cytoplasmic	141	145	0.85
Transmembrane Helix	146	166	0.93
Cytoplasmic	167	200	0.96