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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|50753709
Protein type: Globular with Signal Peptide
Type Confidence: 0.48
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MICVLLEVLW LLHGCWHTGG SWCSPAIGGA LSGHVNASTP SKAVETVLAL SHPPLLMESK  60
   61 GHFKSLTVEW LRARNCVVFL NSLFLRNCLF TAGRSVSLLR SRTRCRQVPS ALTRLQGSAA 120
  121 VASHVREGGR GGAAVTNART PSLAHTGGSW CSPAIGGALS GRVNASTPSK AVETVLALSH 180
  181 PPLLMESKGH FKSLTVEWLR ARNCVVFLNS LFLRNCLFNS SGLHPDLMCL WYQADSQDQG 240
  241 RGPGRAAGPE GRLRCGCWNW GGRRRSFAAE AARSASAREV SVCMLMERAR LGAGPGSSRA 300
  301 LVSLSLRVHV VGATHRSLVE RSGISRRRRR GLGVAVPARP QPLRSVCVGP RLRFLPGWRC 360
  361 SSRTLRGCGT EPPAGGRAAG CALSTPQVSS LGVVEAAEID SRQTRIFCPK AVQSASSPLY 420
  421 LNVWMAFGTG ESLQQHTDMC LLSVDLQCSV CGCSALSNPS RLENVRPRPR VQLAETVELY 480
  481 PVRKAQTALG CLQGAYGCQW GMVELCITAW LRTELLCCSR VPSLPAAAVR VLELVLVSPS 540
  541 SYWILSLLDA PGLSSGPISK RIGPDLLTYT AGSRRWSSYF QCKDVTCVSI GSEHTALLIS 600
  601 CLEKLPEAQR AGVSAVLSLS RAVRVWLQQG GGQPEPASPA SHSSHLCVCA VSHSSSIATW 660
  661 AVAWAKQLGV VCVAQSDRAE QKKAGDSPKC CRLCAGVARC FAQHVFFWCL CNCLQSSVPV 720
  721 VQAAVRELCC ALCAYRGGCS AASVSQADDD TTEVSTLVAL CEDFAIAAVV KAILHEEIID 780
  781 FYKYMSPRHE EERMRMEVVN RIENVIKELW PNADVQIFGS FKTGLYLPTS DIDLFVFGKW 840
  841 ETLPLWTLEE ALRKHNVADE NSVKVLDKAT VPIIKLTDSF TEVKVDISFN VQNGVKAAQL 900
  901 IKDFIKKYPV LPYLVLVLKQ FLLQRDLNEV FTGGIGSYSL FLMAVSFLQL HPREDACTPN 960
  961 ANYGVLLIEF FELYGRHFNY LKTGIRIKDG GSYVAKDEVQ KSMLDGYRPS MLYIEDPLQP1020
 1021 GNDVGRSSYG AMQVKQAFDY AYVVLSHAVS PIAKYYPNNE TESILGRIIR VTQEVATYRD1080
 1081 WISKQWGMQS RTESSCNGNG VTLIVDNQQL DKCNNNLAEE NEALGKPRNK TSETLSKHSS1140
 1141 NSSSGPLSSS SSTLSSSSDV DSDGTPCKTS KQLSCRQPTT NRVGSQEVSL ESSQSSGKTQ1200
 1201 NSQTGNTSSN TNKSQHGSAR LFRSSNKGFQ GPANSSHGTS VTNKQHQGSK SHHQYFHGKK1260
 1261 RKHKRDAALS DLCR

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle