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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|50753587
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.36
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVSGCLAGGG RLMLRSVVEK LWVFVQPCQG RRNFFLDALT PCTTSPINPA SGLQGLILHN  60
   61 HRGRIPASSG QVNQFESRQR RKCQWACRCR ESLCLACIAG CCLSLWLHGD TRDAGCFLLW 120
  121 VLRSKCTPSA AEVRDRCARG ECLVRCRRRL YDLSAFVRLH PGGERLLRSR AGTDVSAALD 180
  181 GPPHRHSANA RRWLEQYYVG ELRDEQVAGC GRPVRCHGGG VGAVESVGRS GVALEGSGVQ 240
  241 KGALGAALEV WGLRAPPGPA CALGDARVGF GADAAPVGIW RSPQQAGGYR GRITPPHFHC 300
  301 RGRTARTEHS GDEGEERQLT QRDGGVYRLR WGADGGRGHG STAGAARWKR TAAFLLCFPA 360
  361 VLPAAGARCR AAALRGRDLT FPALHHGSGR TCSPCDASEA VAASPTGTAP QPPPLRGTGG 420
  421 AGGGLHPDVP TLEAVSSVSF RFLESSRLLS VLLPSPCVTL SQQQCPELAN VPASVSRVPH 480
  481 KALAARRGDA GAVSPPLVSP WSCVGTVPRV PTVWGKTYGW LMGNRAPPNH RSFSLQSCPK 540
  541 VEKPLDAAAP RVDPRCKPVD VGTVRPRSAL RPAQMAQQCL YGPGAAALGG SYVDAGAFEC 600
  601 LSLHHMVADL VDWRKPLLWQ VGYLGEKYDE WVHQPVDRPI RLFHSDFVEA LSKTAWYVVF 660
  661 LVWTPVVLYL SWVSYTALAQ GNTRLFSSFT TEYSIPVHKY YFPFIFLLGM FLWSLLEYLI 720
  721 HRFVFHMKPP ASNYYLITLH FLLHGQHHKS PFDSSRLVFP PVPASLVIAF FYGVLRLLLP 780
  781 EVLGLSVFVG GLCGYVVYDM MHYYLHYGSP KEGTYLYGLK AYHVKHHFEH QKSGFGITTR 840
  841 FWDHPFRTLI PEETFEKED

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle