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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|50752761
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.87
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSACNTFTEH VWKPGECKNC FKPKSLHQLP PVSEKKTLSR DNLKTNANQS NSQRGRNTAS  60
   61 FRPPVAKKPT IAVKPTMMVA DGQGVCGEIG TPDHCENKSV PAGWNRNKAV LHKKPLNNNN 120
  121 EDEIEGYSHV PRPYGSSDGV GKIPNNNNNG LTEVLKEIAG LDTAPQLAGS EMNSRETFLG 180
  181 RINNCYKRSL ERKIPPSCMM GGMKDSHSKH VVLSGSTEVI SNEGGRFCYP EFSSGDESED 240
  241 DAFFGSMQEE HESWDESDEE LLAMEIRMRG QPRFANFRAN TLSPVQFCVD KKWNTVPLRN 300
  301 KSLQRICAVD YDDSYDEILN GYGEETVILY GQESMQSMVS SDSTSPDSSL TEESRSGTAS 360
  361 SSSQKLCNGG LSPSTPQDIK SIEPEYESLC DSQQVKDVSK ASRNVPKSLE THKAILALRL 420
  421 EEKDGKIAVQ TDKQENKSSS DVSGQAVTIN LVPVEEQAKP YRVVNMEQPV CKPYTVVDVS 480
  481 AAMTNECKES QTETSEAKNT SSNPSSPVTP GTPIKSSAAS PARVNTNLKK SSAIRYQEVW 540
  541 TSSTSPRQKI PKVELVANSS GPSVPPRKTS HKSAPTSPTA TNVSSKTIPV KSPNLSEIKF 600
  601 NSYNNAGMPP FPIIIHDEPT YAKSSKNAIK VPIVINPNAY DNLAIYKSFL GTSGELSIKD 660
  661 KTTSVISHTY EEIETENKMS EAIGGKPAEA KGVTNSTECR LGSVAQKVQE FNSCLGKSQR 720
  721 SPQRSHSSDH NSPPRIQKTA QEPADVTPEA SAPTGSSSRE NASTVLSQIV ASIQPPQSPP 780
  781 ETPQAGPKSC SAEELYSLPP DADAAKSTLV RPKSLFTSQS EVESSKTTES TAIKLQKDAA 840
  841 PQPVATNSPK PVRGTPNATS PKTEQAPPFP PPRSTSSPYH ASNLLQRHFS NWAKPNSPTR 900
  901 STEAESILHS EVRRAADAKP KRWISFKSFF RRRKTDDEED REKEREKGKL VGLDGTVIHM 960
  961 LPPPPVQRHH WFSEAKSDSS EKPSIVFMYR CEPTQTEPKA DHQYKSGVES AIADVLAKDK1020
 1021 GETQEKSPES PEQKITSHPS PPQILKKIPS QVPDDTTLED LSPRVPRAVF VKQDNGGSAS1080
 1081 VIPVSAVRAP QGEEDKGEAP HPSDLNPCSA TYSNLVLCIL LPYQTSERLI SGYESSSSYV1140
 1141 FMSAPKATSS ENYDSALTET SSNMLISLCE RQSRAAMIPP KQPRQPKGAL DDAIAFGGIV1200
 1201 DQETMNSLQP TPPPLPKKTI LRANTEPSPR DLQKQALENN LCIVANPTYD IDTNWEASSA1260
 1261 CSSVSLELKA LDNESGDSLD RPTEKLRTTT SATNSVSSLT TISIKDRCSN SMESLTGRRL1320
 1321 SQSKQSRGVQ KPQRQALYRG IENREEVVGK IRSLHTDSLK KLALKCEDLF MAGQKDQLRF1380
 1381 GVDSWSDFRL TSDKPCCEAG DAVYYPASYA KDPLNHYAVK ICKSKAKESQ QYYHSLSIRQ1440
 1441 SLAINFNIQQ DCGHFLAEVP VRLLPWEDAD APEVEEEQEE EQEPEQKNGG TPSSTEASQK1500
 1501 DSSSNQGTIS KPRSRVVVIT REVPYLTVAD FVRESAPRHA KSPDLYERQV CLLLLQLCLG1560
 1561 LEHLKPYHIT HCDLRLENLL LVHSRPGGGP LSSESVEPGP STACPARLIV SNFSQAKQKS1620
 1621 HMVDPEVLRD QSRLAPEIIT ATQYKKCDEF QTGILIYEML HLPNPFDENP ELKEKEYTHA1680
 1681 DLPKIPCRSL YSQGLQQLAS CLLNPNPSER ILISEAKGIL QCLLWGPRED LFHALRTSSN1740
 1741 PARKDAVLQN WLDIKRTLLM IKFAEKSFDR DCGVILEDWL CCQYLAFATV DSLHRIMAVV1800
 1801 LLIAPMSAGK GEDGGTDGEE KRLCFKSPSA MYVVEIPRYI GKESFYTTAE QLRSQTQSGL1860
 1861 RYSFGVLEAD FAGVPITLML VMVMFVVVLH PGNGYCRINI RECEYIEDLS AKPYLEIFRN1920
 1921 EGIQNLILEP RQCPVQRPDL SSAFRHDETN NTSRDALLLA CRQERTQHLL QHSTLNLVCS1980
 1981 THPSSPHKCT TITQCMSGPC AQLWYCRDGV GSATAPAKPT AQRALRCTAQ KCDGDVVLHL2040
 2041 QNQDIQLLEV TDSYLRLSHK TLYYISYSKK VRNGNEELIA KLIRHKLREQ RAGSPTSGSS2100
 2101 PAPQNWGPYE IRQPRRSENW PIKSSTEGRK AMPIQNASEP RLWNADEEYE RNRCNIFLEL2160
 2161 QPGCPPASTL PGPGRHGNCA HLRPDSRGGS FKEERFAILG SPAPSCHVTR AAAILGSPRR2220
 2221 RFWLPGSRGV GPAELRGGER SGAEPGGRRL RGGGSDTMGQ CGITSSKTVL VFLNLIFWAA2280
 2281 AGILCYVGAY VFITYDDYDH FFEDVYTLIP AVIIIAVGTL LFIIGLIGCC ATIRESRCGL2340
 2341 ATFVIILLLV FITEVVVVVL GYIYRAKVED EVDHSIQKVY NGYNGTNPDA ASRAIDYVQR2400
 2401 QLRCCGIHNY TDWENTVWFK QTKNNSVPLS CCKATLSNCT GSLTRPMDLY SEGCEALVVK2460
 2461 KLQEIMMYVI WAALAFAAIQ LLGMLCACIV LCRRSRDPAY ELLITGGTYA 

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