YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|50752331
Protein type:	Globular with Signal Peptide
Type Confidence:	0.96
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPAAAASSYV RRSLPAAQLS SAGLYRGAPA GASAAPDWSF RRGGESGRWD WLRRPVAGAR  60
   61 ECEGEGRGVL RRRCQRRSRP GPRSQASPAQ PPPPAARRGR TMSATDERAK EILRGFKLNW 120
  121 MNLRDAETGK ILWQGTEDLS VPGVEHEARV PKKILKCKAV SRELNFSSAE QMEKFRLEQK 180
  181 VYFKGQCLEE WFFEFGFVIP NSTNTWQSLI EAAPESQMMS ANVLTGNVII ETKFYDDDLL 240
  241 VSTSRVRLFY V

Type	Start	End	Confidence
Signal Peptide	1	34	0.95
N-region	1	25
H-region	26	31
C-region	32	34
Cleavage Site	34	35
Non-Cytoplasmic	35	251	0.99