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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: DLD_ARATH
Protein type: Transmembrane
Type Confidence: 0.69
Topology Confidence: 0.65
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAFASKFARS KTILSFLRPC RQLHSTPKST GDVTVLSPVK GRRRLPTCWS SSLFPLAIAA  60
   61 SATSFAYLNL SNPSISESSS ALDSRDITVG GKDSTEAVVK GEYKQVPKEL ISQLKTILED 120
  121 NLTTDYDERY FHGKPQNSFH KAVNIPDVVV FPRSEEEVSK ILKSCNEYKV PIVPYGGATS 180
  181 IEGHTLAPKG GVCIDMSLMK RVKALHVEDM DVIVEPGIGW LELNEYLEEY GLFFPLDPGP 240
  241 GASIGGMCAT RCSGSLAVRY GTMRDNVISL KVVLPNGDVV KTASRARKSA AGYDLTRLII 300
  301 GSEGTLGVIT EITLRLQKIP QHSVVAVCNF PTVKDAADVA IATMMSGIQV SRVELLDEVQ 360
  361 IRAINMANGK NLTEAPTLMF EFIGTEAYTR EQTQIVQQIA SKHNGSDFMF AEEPEAKKEL 420
  421 WKIRKEALWA CYAMAPGHEA MITDVCVPLS HLAELISRSK KELDASSLLC TVIAHAGDGN 480
  481 FHTCIMFDPS SEEQRREAER LNHFMVHSAL SMDGTCTGEH GVGTGKMKYL EKELGIEALQ 540
  541 TMKRIKKTLD PNDIMNPGKL IPPHVCF

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle