YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|50751915
Protein type:	Globular with Signal Peptide
Type Confidence:	0.76
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRLVGSSGLR AAAPSGPREE NRPVWFCFAV VSCPAAAGGE RRYCCWLMYG RCVVQGSVFH  60
   61 TGGSQGLQPW YQGGMSAAKW RCTELKAHCD VQSGRWRCTC SSHLTVRDCV SAAAPPLGLS 120
  121 VRKHSCMVSL SGPPGGSRCS LGSGFIGSCV CKTSGLKALV HPQPPALPLT HTHPQGPPPP 180
  181 APVSAAPPGG RRDSMRCTSG RRVFRFRAPR LPFPGEAMAA GGSDPRTADV EEDASQLVFP 240
  241 KEFETAETLL NSEVHMLLEH RKQQNESAED EQELSEVFMK TLNYTARFSR FKNRETIASV 300
  301 RSLLLQKKLH KFELACLANL CPETAEEAKA LIPSLEGRFE DEELQQILDD IQTKRSFQY

Type	Start	End	Confidence
Signal Peptide	1	37	0.75
N-region	1	28
H-region	29	34
C-region	35	37
Cleavage Site	37	38
Non-Cytoplasmic	38	359	0.99