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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|50751043
Protein type: Transmembrane
Type Confidence: 0.92
Topology Confidence: 0.90
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEGLIPLVNR LQDAFAALGQ SCLLDLPQIA VVGGQSAGKS SVLENCVSRD FLPRGSGIVT  60
   61 RRPLVLQLVT AKTEYAEFLH CKGRKFTDFD EVRQEIEVET DRITGVNKGI SSIPINLRIY 120
  121 SPHVLSLTLI DLPGITKVPV GDQPPDIEQQ IRDMIMQFIS RENCLILAVT PANTDLANSD 180
  181 ALKLAKEVDP QGLRTIGVIT KLDLMDEGTD ARDVLENKLL PLRRGYIGVV NRSQKDIDGK 240
  241 KDIKAALLAE RKFFLSHPAY RHMADRMGTP YLQKVLNQQL TNHIRDTLPA FRSKLQSQLL 300
  301 SIEHEVEVYK NFRPEDPTRK TKALLQAMRT IGINESRHSG AVCGSDSISL LLGEKLDVRA 360
  361 VDFVKYAEFL HCKGRKFTDF DEVRQEIEVE TDRITGVNKG ISSIPINLRI YSPHDQSFNV 420
  421 ATVICIGQTP KVFPVLSLTL IDLPGITKVP VGDQPPDIEQ QIRDMIMQFI SRENCLILAV 480
  481 TPANTDLANS DALKLAKEVD PQGYIGVVNR SQKDIDGKKD IKAALLAERK FFLSHPAYRH 540
  541 MADRMGTPYL QKVLNQPEGN GSVLAFIVMN MLKVLLLFAF QQLPNHIRDT LPAFRSKLQS 600
  601 QLLSIEHEVE VYKNFRPEDP TRKTKALLQT LSNKTIFTVV AEEEKGICVN LIGLLQQWLY 660
  661 VECCCCHSSL RTGLFTPDMA FEAIVKKQIV KLKGPCLKSV DLVMQELINT VKKCTKKLAT 720
  721 YPRLCEETER IVAGYIRERE EKTKDQVLLL IDIQVSYINT NHEDFIGFAK EPIYRLQGKL 780
  781 YELSSKEDSE LQKNLSASEC SPCTPEAVCF SRKKVLFLAS MLTNDLKNYT RTVIRKGWLT 840
  841 INNIGIMKGG SKEYWFVLTA ESLSWYKDDE KSIYNDLSKA KSIKELCHIL VHKKIQVASP 900
  901 IDQDWLKNTG ESGYAVLQVL SVKERLQWLK DPLHLLGAVQ DGDVGSELPG AQQYVCGSAI 960
  961 WFDLINDKDL KAHNGITKEQ VREAIECLWS PVSVTPLTGS LGVFEFQTGK EMEICMHIEV1020
 1021 LIASVCIQTV CEYNERKTFS RARKSEMRPY FMVSEGKDSC NHCEFLDSGM LGIRGVHSLS1080
 1081 NLDKRFTHQL QSFSSYVFQL LIQNGGTSER WKNSVWGIYL CQLSAHHFVF MSVLAMKSLP1140
 1141 LALTLIIVLK LLRTLKDTEC FIGPLRQLAL STQFSYCSVF AMRKSAVPSR VPVPAGPDDV1200
 1201 KNCLWTVTVK DNLSLVTIER IWQRGVEVQS LDLVPALCCI VTSCCALCSY WENRQDKDCI1260
 1261 AEPTGTCFQC QVFDSSQIWC SDIILSLCFS KGTKEKEKKY MLPLDNLKVR DVEKSFMSSK1320
 1321 HIFALFNTEQ RNVYKDYRFL ELACDSQEEV DSWKASLLRA GVYPDKSSTE NDENGQADNF1380
 1381 SMDPQLERQV ETIRNLVDSY MSIINKCIRD LIPKTIMHLM INNVTASNLL LPLSTTSVPF1440
 1441 KRAVFQLSFH ELQSCLPTGK SEFFVSPSYP ILEGKGRLCS VGVLDAGCDS ALTAGLKSVK1500
 1501 EFINAELLAH LYSSEDQNTL MEESAEQAQR RDEMLRMYQA LKEALAIIGD ISTSTVSTPA1560
 1561 PPPVDDSWLQ QARRSPPPSP STQRRPTLNN PPTRPLSGRG PAPAIPSPGP QSGAPPVPFR1620
 1621 PGPLPPFPSG GEAHGGPPQV PSRPTRAPPS VPSCTGSLVK NRALNGCINE IDMDNVSCCH1680
 1681 HGQEEVPVQR EPVQPDLRGF AALRLPQLQV HGQAAAPSAA LLAGLCTAAI WRGWHRRPPP1740
 1741 SPTRPTVIRP LDSSLLD

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