YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|50750730
Protein type:	Globular with Signal Peptide
Type Confidence:	0.79
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGASEPKLCF LRSGADAGCL LCFGAALCHY RGGQAGGRHL EAEGRRAPRG RSGAGGSRYS  60
   61 HLEKMTDLVA VWEVALSDGV HKIEFEHGTT SGKRVVYVDG KEIIRKEWMF KLVGKETFTV 120
  121 GVSKTRATIN IDAVSGFAYE YTLEINGKSL KKYMENRSKT TNTWVLSLGG TDYRVVLEKD 180
  181 TMDVWCNGEK METAGEFVED GTETHFSVGD HSCYIKAVSS GKRKEGIIHT LIVDDREIPE 240
  241 AVE

Type	Start	End	Confidence
Signal Peptide	1	28	0.79
N-region	1	19
H-region	20	25
C-region	26	28
Cleavage Site	28	29
Non-Cytoplasmic	29	243	0.98