YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|50750565
Protein type:	Globular with Signal Peptide
Type Confidence:	0.94
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MASKVSCLYV LTVVCWASAL WYLSITRPTS SYTGHRQVSS ISIARKNVSF GNIRTRPINP  60
   61 HSFDFLINEP NKCEKSVPFL VILISTTHKE FDARQAIRET WGDENNFKGI KIATLFLLGK 120
  121 NADPVLNQMV EQESQIFHDI IVEDFIDSYH NLTLKTLMGM RWVATYCSKA KYVMKTDSDI 180
  181 FVNMDNLIYK LLKPNTKPRR RYFTGYVING GPIRDVRSKW YMPRDLYPDS NYPPFCSGTG 240
  241 YIFSADVAEL IYKTSLHTRL LHLEDVYVGL CLRKLGIHPF QNSGFNHWKM AYSLCRYRRV 300
  301 ITVHQITPEE MHRIWNDMSS KKHLRC

Type	Start	End	Confidence
Signal Peptide	1	19	0.92
N-region	1	10
H-region	11	16
C-region	17	19
Cleavage Site	19	20
Non-Cytoplasmic	20	326	0.99