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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|50750107
Protein type: Transmembrane
Type Confidence: 0.98
Topology Confidence: 0.74
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAAAARGLRL SKSDAAAVER VAGRWRAGCA LRAGPGGEGC RAVCAMELQK DDVKSKQQCL  60
   61 VHASLRCPYP EEAQQSISRG LAALSEESLP YLSTSLDADI DMYNMRMRTC SAEVAESKRE 120
  121 ADALRRARGG DAHSTCGVCD GGSHIHVGED SQLEYISANE EGFDDGDSSD ELSKQRKAVG 180
  181 IETPMAVDPV HDIAGGGAAK EQNLADSTSE CCTGAEAAMP ELPQLFPDSL LVGSGTACDC 240
  241 KEEQAVSLSG RAGSMVESHA YRSRERSYPN LLAIHRSEVK DASSPNSTQS QQNHRCVHST 300
  301 LVEQGSPSLS PRERTLATAT QFCKSAGDSD FYSCEEPLLC MCGASCAYCA AKADENQCPA 360
  361 PEFLTINDLC FGEEAAGKSY SANTTASLNS ECCENLTGCL ELVLQRKQDH SLLMCTRMAV 420
  421 LQQLKEVHKL SSVSGMRKAG FEASVLQEIR TPVNMEKAQT TCLTDGQQPS DSPSSRMSQE 480
  481 QGMQHGYVRN KEWNECWFDA KEDFAVTDFS VTPEEVGKHQ EKQDTVGLRE AKITEGANEC 540
  541 TFVCIGGLSS SVSEGDLRSH FQKYQISVIL LCADSDNHRC AVLGFKDTSA AKLAVEEMNK 600
  601 TKIKGKPISV ELVSNPSENR SSAARILGKK LCTAQGKASP TQTLPEICFG LIREHSAFCL 660
  661 PVELLPAFYI LFWPWKERQL SSWLPVLLKA ALPALPIPAG GAVRTRLISV KAKQARRTGT 720
  721 IARQLPARRQ PGPSLLAMAL LPRRFLCFVL AHHFIAATAC HEAEYGRQIR ERCLRPFKLS 780
  781 MEGIGQRLWC DWDETMGTYG ELTNCTVAVA ENLTCYWPNR LVDEFFVAVH SHYFRNCSPS 840
  841 GRALRDPPNS ILCPFILVPI LVTLLMTALV VWRSKRSEGI V

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle