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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|50749514
Protein type: Globular with Signal Peptide
Type Confidence: 0.74
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MFVEVAEPLT AALPSACSGC SARAPSGPEA ERSWQPPLPA LSCWHALLPL DLELPRQDDD  60
   61 SSGSLASISA LSLLNTGEYE ARTGRTYKPP PPSARRKNIE FEPLSTTALI LEDRPANLPA 120
  121 KSVEEALRHR QEYDEMVAEA KKREIKEAHK RKKIMRERFK QEDNIASAMV IWVNEILPNW 180
  181 EGMRATRRVR ELWWQGLPPS VRGKVWSLAV GNELNITPEL YEIFLSRAKE RWKSFSETSS 240
  241 ENDVEDASAS VADREASLEL IKLDISRTFP SLYIFQKGGP YHDLLHSVLG AYTCYRPDVG 300
  301 YVQGMSFIAA VLILNLEEAD AFIAFANLLN KPCQLAFFRV DHSMMLKYFA AFEVFFEENL 360
  361 PKLFLHFKSY SLTPDIYLID WIFTLYSKSL PLDLACRVWD VFCRDGEEFL FRTGLGILRL 420
  421 YEDILLQMDF IHIAQFLTKL PEDITSEKLF SCIAAIQMQN SNKKWAQILY NNFMFVGVGN 480
  481 LKWIALQRKN TKRVPSFRKL LRTSKIKLDN KLKNKQYKQQ SAAKKYRKEQ KKLRQAVRDA 540
  541 VCKKPFPLED YKKKHVAEKQ EEEEEDEALP LDMMDEDDLK LMEDLARKAS FLTRDISSNE 600
  601 PVHIKKRKRD SVIEKYEKIP RRINAEPEKE LIHLLPIKDK GGIIPQTMEK PVPDVAEDEE 660
  661 EDMEEMEVAE ELNEEPPPVL TPEEMAAQRK VKLQERKMHI AALASAILSD PENNIKKLKE 720
  721 LRAMLMEQDP NVAVIVRKLV MVSLMEVFKD IAPSYKIRPL TEAEKATKVK KETQKLREFE 780
  781 EGLVSQYKFY LENLEQTIKD WKQRKLKKSN VVSLKAYKGL AEIAVKCLCE LLVALPHFNF 840
  841 HNNIIVLIVP LMNDASKTIS ELCCEAVKKL FKQDKLGFAS LGVVKVVSGL VKGRNYNVRP 900
  901 EVLKVFLHLR IKEVELKKDS EDIAPKKKFM TFKEKRKHLS RMQRKWKKAE EKLERELLEA 960
  961 EASESKEKKL KLHTETLNIV FLTYFRILKR AQKSPLLPAV LEGLAKFAHL INVEFFDDLL1020
 1021 IVLHSLISSD DLSYRESLHC ILSAFQILSG QGDVLNIDPM KFYTHLYKTL FSLHAGGTND1080
 1081 DIGIVLQCLD VMLAKRRKQV SQQRALAFMK RLSTLALHVL PHSSIGILAT NRILMQTFPK1140
 1141 MDLLLDNESQ GSGVYLPELD EPEHCNAQNT ALWELHLLQR HYHPTVQKFA AHLAVGAPAE1200
 1201 GSGALSLDLS RSLPAVLSKQ FARSSTHDLV FTIFSTLSEL KPTEPGADLV ETQFLS

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle