YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|50749454
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.89
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNMPLHQISV IPAQDVTSSR VSRSKTKEKE EQNEKALGHS VSRSSNISKA GSPTSITAPN  60
   61 SFSRTSVTPS NQDICRICHC EGDDESPLIT PCHCTGSLHF VHQACLQQWI KSSDTRCCEL 120
  121 CKYEFIMETK LKPLRKWEKL QMTASERRKI MCSVTFHIIA ITCVVWSLYV LIDRTAEEIK 180
  181 QGQTTGILEW PFWTKLVVVA IGFTGGLLFM YVQCKVYVQL WKRLKAYNRV IYVQNCPETS 240
  241 KKNIFEKPAL MEPNFESKEM LGVHHSDTNS SHYTEPEDCA AEILHV

Type	Start	End	Confidence
Cytoplasmic	1	149	0.99
Transmembrane Helix	150	172	0.89
Non-Cytoplasmic	173	191	0.95
Transmembrane Helix	192	214	0.90
Cytoplasmic	215	286	0.97