YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|22136628, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.50
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEKYSRRSIL LSTVVAAVLF SLIPVSISIP FILFHGIGDK CSGGVSNFTQ LLTNLSGSPG  60
   61 YCLEIGNGEK DSWFMPLRKQ TSVACEKVKA MKVLSQGYNI VAESQGNLVA RGLIEFCDNA 120
  121 PPVINYISLG GPHAGIAKIP KCNSGPICAI GEALLKLEVY TDFVQDHIAP SGYIKIPGEI 180
  181 SKYLEHSKYL PKLNNERPDE RNSTFKDRFT NLHNLVLVMF ESDTMLIPKE TAWFGYYEDE 240
  241 GFDTLLSAQQ TKLYREDWIG LKALDAAGKV KFESVLGDHL SISDEEVVEF VVPYLMQNCM 300
  301

Type	Start	End	Confidence
Signal Peptide	1	28	0.49
N-region	1	19
H-region	20	25
C-region	26	28
Cleavage Site	28	29
Non-Cytoplasmic	29	300	0.97