YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	ATCA7_ARATH
Protein type:	Globular with Signal Peptide
Type Confidence:	0.98
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVNYSSISCI FFVALFSIFT IVSISSAASS HGEVEDEREF NYKKNDEKGP ERWGELKPEW  60
   61 EMCGKGEMQS PIDLMNERVN IVSHLGRLNR DYNPSNATLK NRGHDIMLKF EDGAGTIKIN 120
  121 GFEYELQQLH WHSPSEHTIN GRRFALELHM VHEGRNRRMA VVTVLYKIGR ADTFIRSLEK 180
  181 ELEGIAEMEE AEKNVGMIDP TKIKIGSRKY YRYTGSLTTP PCTQNVTWSV VRKVRTVTRK 240
  241 QVKLLRVAVH DDANSNARPV QPTNKRIVHL YRPIV

Type	Start	End	Confidence
Signal Peptide	1	27	0.98
N-region	1	18
H-region	19	24
C-region	25	27
Cleavage Site	27	28
Non-Cytoplasmic	28	275	0.99