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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: TKTC1_ARATH
Protein type: Globular with Signal Peptide
Type Confidence: 0.91
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MASTSSLALS QALLARAISH HGSDQRGSLP AFSGLKSTGS RASASSRRRI AQSMTKNRSL  60
   61 RPLVRAAAVE TVEPTTDSSI VDKSVNSIRF LAIDAVEKAK SGHPGLPMGC APMAHILYDE 120
  121 VMRYNPKNPY WFNRDRFVLS AGHGCMLLYA LLHLAGYDSV QEEDLKQFRQ WGSKTPGHPE 180
  181 NFETPGIEVT TGPLGQGIAN AVGLALAEKH LAARFNKPDA EVVDHYTYAI LGDGCQMEGI 240
  241 SNEACSLAGH WGLGKLIAFY DDNHISIDGD TEIAFTENVD QRFEALGWHV IWVKNGNTGY 300
  301 DEIRAAIKEA KTVTDKPTLI KVTTTIGYGS PNKANSYSVH GAALGEKEVE ATRNNLGWPY 360
  361 EPFQVPDDVK SHWSRHTPEG ATLESDWSAK FAAYEKKYPE EASELKSIIT GELPAGWEKA 420
  421 LPTYTPESPG DATRNLSQQC LNALAKVVPG FLGGSADLAS SNMTLLKAFG DFQKATPEER 480
  481 NLRFGVREHG MGAICNGIAL HSPGLIPYCA TFFVFTDYMR GAMRISALSE AGVIYVMTHD 540
  541 SIGLGEDGPT HQPIEHIASF RAMPNTLMFR PADGNETAGA YKIAVTKRKT PSILALSRQK 600
  601 LPHLPGTSIE GVEKGGYTIS DDSSGNKPDV ILIGTGSELE IAAQAAEVLR KDGKTVRVVS 660
  661 FVCWELFDEQ SDEYKESVLP SDVSARVSIE AASTFGWGKI VGGKGKSIGI NSFGASAPAP 720
  721 LLYKEFGITV EAVVDAAKSF F

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle