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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: RMR2_ARATH
Protein type: Transmembrane with Signal Peptide
Type Confidence: 0.99
Topology Confidence: 0.75
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNRALVLLLY VCTVSCLASS KVILMRNNIT LSFDDIEANF APSVKGTGEI GVVYVAEPLD  60
   61 ACQNLMNKPE QSSNETSPFV LIVRGGCSFE EKVRKAQRAG FKAAIIYDNE DRGTLIAMAG 120
  121 NSGGIRIHAV FVTKETGEVL KEYAGFPDTK VWLIPSFENS AWSIMAVSFI SLLAMSAVLA 180
  181 TCFFVRRHRI RRRTSRSSRV REFHGMSRRL VKAMPSLIFS SFHEDNTTAF TCAICLEDYT 240
  241 VGDKLRLLPC CHKFHAACVD SWLTSWRTFC PVCKRDARTS TGEPPASEST PLLSSAASSF 300
  301 TSSSLHSSVR SSALLIGPSL GSLPTSISFS PAYASSSYIR QSFQSSSNRR SPPISVSRSS 360
  361 VDLRQQAASP SPSPSQRSYI SHMASPQSLG YPTISPFNTR YMSPYRPSPS NASPAMAGSS 420
  421 NYPLNPLRYS ESAGTFSPYA SANSLPDC

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle