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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|22136838, gi|...
Protein type: Transmembrane with Signal Peptide
Type Confidence: 0.97
Topology Confidence: 0.75
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MASLLRSLIL LLIVQSFLVA IAFGSKEVEE FSEALLLKPL PDRKVLAHFH FENRAPPSNS  60
   61 HGRHHHLFPK AISQLVQKFR VKEMELSFTQ GRWNHEHWGG FDPLSSMNAK PVGVELWAVF 120
  121 DVPQSQVDTS WKNLTHALSG LFCASINFLE SSTSYAAPTW GFGPNSDKLR YGSLPREAVC 180
  181 TENLTPWLKL LPCRDKDGIS ALMNRPSVYR GFYHSQRLHL STVESGQEGL GSGIVLEQTL 240
  241 TVVLQPETTS VESNMQPSWS LSSLFGRQVV GRCVLAKSSN VYLQLEGLLG YESKNVDTEI 300
  301 EAHQLWKNAE FELSLKPERV IRESCSFLFI FDIDKSSDSE PFDLGLTWKR PSKWSCQQAP 360
  361 LHSSRFLMGS GNERGAIAIL LKATESQEKL SGRDLTNGQC TIKANIFQIF PWYIKVYYHT 420
  421 LQIFVDQQQK TDSEVLKKIN VSPSTDKVSS GMMEMMLELP CEVKSVAISI EYDKGFLHID 480
  481 EYPPDANQGF DIPSALISFP DHHASLDFQE ELSNSPLLSS LKEKSLVRSY TEVLLVPLTT 540
  541 PDFSMPYNVI TITCTIFALY FGSLLNVLRR RIGEEERFLK SQAGKKTGGL KQLLSRITAK 600
  601 IRGRPIEAPS SSEAESSVLS SKLILKIILV AGAAAAWQYF STDE

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle