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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|56118982, gi|...
Protein type: Transmembrane
Type Confidence: 0.72
Topology Confidence: 0.64
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDAISPYKEI LQMYWEKVTS FVNAHCDGLE PWQLVGLTFS STLLTVWLHG FLFQSESLTS  60
   61 RTKKQFFRLL RKMPFVGAII QKKIDEALND VTSSLSFLKD EKDYIKVLPE QGMSQPEVLQ 120
  121 KMKEYSSKGD VRWEDGKVSG TVYSGEEKLT HLLVKVYEEF AWSNPLHPDI FPGLRKMEAE 180
  181 VVRIACSLFH GGPSSCGAMT SGGTESILMA CKAYRDLAYE RGIKHPEMLV PVSAHAAFDK 240
  241 AAHYFGMKLI HIPLTKAMEV DVQAMRRTIS KNTAMLVCSA PQFPHGIMDP IEEVAELAVK 300
  301 YKIPFHVDAC LGGFLIVFME KAGFPLKRLF DFRVKGVTSI SADTHKYGYA PKGSSVVLYS 360
  361 DKKYRSYQYF VAPDWQGGIY ASPSIAGSRA GGIIAACWAT LMHMGESGYV EATKRIIKTA 420
  421 RFLESELRKI DSIFIFGKPE VSVLSIGSDT FDIYRLSNLL AAKGWNLNIL QFPPSIHLCI 480
  481 TQLHTKSGVA EQFLKDVKDS IEDIMNNLNA KTTGMGAIYG MAQSIPDRSL VAEISLAYLD 540
  541 GLYSTDVPGS EKHMNGSPGH H

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle